Computational model creation and editing
Table view of the model
Unit usage
How and where are units used ?
SBML document import
You can import SBML model in Jinkō.
Phase portraits
Introduction to Phase Portraits
Computational model calibration
Calibration, or parameter estimation, consists in solving the inverse problem of finding descriptors (species, parameters or compartments) values such that the computational model outputs match some user-defined fitness criteria.
Virtual population creation from a computational model
Once a Computational Model (CM) is imported in Jinkō, you can create from it as many virtual populations as needed in order to conduct simulated trials. In Jinkō, this process is simplified via the use of an automatically generated framework, called a Vpop Design, comprised of marginal distributions of descriptors issued from the model and of correlations between these descriptors.
Virtual population upload
You can upload your population in Jinkō with two different formats (JSON and CSV). This can be done using the create VPOP feature
Virtual population subsampling
Subsampling
Exporting computational models from Jinkō
Download a computational model from Jinkō in SBML, JSON, Julia, or R formats.
Using formulas
How to use formulas
Efficient solving
How Jinkō runs complex trial simulations at high speed, through JIT compilation, parallelization, and adaptive ODE solvers.